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by datons

Overview

Interact with AI assistants to query real-world medical and pharmaceutical data from PubMed and OpenFDA using Model Context Protocol (MCP) servers.

Installation

Run Command
bash -c "source /workspaces/CC/mcp-servers/pubmearch/.venv/bin/activate && python -m pubmearch.server"

Environment Variables

  • NCBI_USER_EMAIL
  • NCBI_USER_API_KEY
  • FDA_API_KEY

Security Notes

The project integrates with well-known public APIs (PubMed, OpenFDA). API keys are managed via environment variables ('.env' file) and not hardcoded, which is good practice. MCP server communication uses 'stdio', reducing external network attack surface for internal communication. No 'eval' or obvious obfuscation detected in the provided code. As with any system interacting with external APIs, there's inherent reliance on the security of those external services.

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Stats

Interest Score0
Security Score9
Cost ClassMedium
Avg Tokens800
Stars0
Forks0
Last Update2025-12-05

Tags

AI ChatMedical DataPubMedFDAMCP ServerVSCode Copilot