PDBe-MCP-Servers
Verified Safeby PDBeurope
Overview
Provides Model Context Protocol (MCP) servers to integrate PDBe's structural biology data (API, Graph, Search) into AI-powered applications like Claude Desktop.
Installation
uvx pdbe-mcp-server --server-type pdbe_api_serverSecurity Notes
The server acts as an adapter making HTTP requests to well-known PDBe APIs. The HTTPClient includes retry logic and handles common request exceptions. No explicit use of 'eval', 'exec', or direct unsanitized system command execution was found within the provided source. Configuration URLs for PDBe services are public. Dependency management with 'uv' enhances project security. User input via MCP tools is processed internally and not directly executed as system commands, mitigating common injection risks. Assumes the underlying PDBe APIs are secure.
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